dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01399
Location and strand information: 83506 - 84603 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.7615
Protein molecular weight: 41114.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01400
Location and strand information: 84627 - 86396 (-)
Family: 8.A.46.1.6
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01401
Location and strand information: 86408 - 89497 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01402
Location and strand information: 89596 - 91581 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01403
Location and strand information: 91806 - 93047 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6894
Protein molecular weight: 46203.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01404
Location and strand information: 93068 - 94297 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6186
Protein molecular weight: 46122.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01405
Location and strand information: 94472 - 98488 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01406
Location and strand information: 98598 - 100217 (-)
Family: 3.A.1.121.4
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YbiT

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01407
Location and strand information: 100394 - 101005 (+)
Family: null
Protein type: null
Protein description: Protein GrpE

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01408
Location and strand information: 101019 - 102188 (+)
Family: null
Protein type: null
Protein description: Chaperone protein DnaJ

Gene clsuter ID: MGYG000004094_8|CGC2
Gene ID: MGYG000004094_01409
Location and strand information: 102268 - 104181 (-)
Family: 9.B.18.2.1
Protein type: TC
Protein description: UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004094_01399	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	83506	84603	-	GH105
MGYG000004094_01400	hypothetical protein	TC	84627	86396	-	8.A.46.1.6
MGYG000004094_01401	hypothetical protein	TC	86408	89497	-	1.B.14.6.1
MGYG000004094_01402	hypothetical protein	null	89596	91581	-	No domain
MGYG000004094_01403	hypothetical protein	CAZyme	91806	93047	-	GH154
MGYG000004094_01404	hypothetical protein	CAZyme	93068	94297	-	GH154
MGYG000004094_01405	Sensor histidine kinase RcsC	TF	94472	98488	+	HTH_AraC
MGYG000004094_01406	putative ABC transporter ATP-binding protein YbiT	TC	98598	100217	-	3.A.1.121.4
MGYG000004094_01407	Protein GrpE	null	100394	101005	+	GrpE
MGYG000004094_01408	Chaperone protein DnaJ	null	101019	102188	+	DnaJ\| DnaJ_C\| DnaJ_CXXCXGXG
MGYG000004094_01409	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	TC	102268	104181	-	9.B.18.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature